DASMergerLinks

From BioDAS
Revision as of 14:26, 14 November 2008 by Jw12 (talk)
Jump to: navigation, search
  • Write back for DAS2
http://biodas.org/documents/das2/das2_writeback.html
http://code.google.com/p/daswriteback/ at the bottom of this page is a link to the masters thesis on this as well. Is there any more recent stuff on this from Gustavo, other than the reams of emails on the das list...  Andy? 


  • Ontologies
http://www.dasregistry.org/extension_ontology.jsp


  • 1.53 Extensions
http://www.dasregistry.org/spec_1.53E.jsp links to the main extensions including sources (taken from DAS2 http://biodas.org/documents/das2/das2_get.html#sources_overview), alignment, structure, interaction and volmap.
  • hierarchy's - nothing for DAS1 for DAS2:
http://biodas.org/documents/das2/das2_get.html#features_detailed
  • style sheets
http://www.biodas.org/wiki/Spec_Review#Stylesheet_Command
http://biodas.org/documents/das2/das2_stylesheet.html
  • date formats, date of annotations
http://www.dasregistry.org/extension_timestamp.jsp
http://biodas.org/documents/das2/das2_get.html#iso_dates
  • next feature/ previous feature cmd.
  • GFF3 as a standard within DAS?
  • "UCSC sources filtered by types" implementation catered for in the DAS

Registry

  • currently there is nothing implemented in the registry for this
  • "wait" response from DAS Servers...