Difference between revisions of "DASWorkshop2011"

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(Created page with 'The Agenda Items and timetable for this years workshop are currently being put together, but as a guide you can visit http://www.biodas.org/wiki/DASWorkshop2010 for an idea of th…')
 
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The Agenda Items and timetable for this years workshop are currently being put together, but as a guide you can visit http://www.biodas.org/wiki/DASWorkshop2010 for an idea of the likely content and times.
+
The 2011 DAS Workshop will be held on 2-4 Marchl at the EBI Hinxton campus.
 +
* Information & registration: http://www.ebi.ac.uk//training/onsite/110302DAS.html
 +
 
 +
 
 +
=DAS Workshop 2011 Schedule=
 +
The first 2 days will be held in the EBI training room. 3rd day room to be announced.
 +
==Day 1==
 +
 
 +
 
 +
{| class="wikitable" border="1"
 +
|- style="background:silver"
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! width="100px"|Time
 +
! Title
 +
! Speaker
 +
! Resources
 +
|-  style="background:#ffdead;"
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| 8:45 - 9:30
 +
| colspan="3" | Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
 +
|- style="background:#ffdead;"
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| 9:30 - 10:00
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| colspan="3" | Coffee is served outside the training room
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|-
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| 10:00 - 10:10
 +
| Welcome and Introduction to the Workshop
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| Jonathan Warren
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|
 +
|-
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| 10:10 - 10:30
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| DAS - Introduction/Overview
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| Andy Jenkinson
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| [http://www.ebi.ac.uk/~aj/das_workshop_2010/DAS-Introduction.pptx Basic Introduction] [http://www.ebi.ac.uk/~aj/das_workshop_2010/DAS-Introduction-Technical.pptx Technical Introduction]
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|-
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| 10:30 - 10:40
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| The DAS Game
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| Rafael Jimenez
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| [http://www.ebi.ac.uk/~rafael/talks/2010-04-07_workshop_das/dasGame/ Game cards]
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|-
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| 10:40 - 11:40
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| Hands on DAS Server Tutorials - Setting up a quick source for sharing data with your colleagues using Proserver or MyDAS - The room will be split into two groups: one for Java and one for Perl.
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| Andy Jenkinson, Gustavo Salazar
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| Introduction talk: [http://oware.cbio.uct.ac.za/~gustavo/DASservers.ppt PPT] Java:[http://code.google.com/p/mydas/wiki/MyDASTutorial MyDAS Part 1] Perl:[http://www.ebi.ac.uk/~aj/das_workshop_2010/proserver_tutorial_1.html ProServer Part 1]
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|-
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| 11:40 - 12:15
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| The DAS Registry and registering your source
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| Jonathan Warren
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|[http://www.biodas.org/wiki/RegistryTutorial2010 RegistryTutorial2010]
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|- style="background:#ffdead;"
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| 12:15 - 13:15
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| colspan="3" | Lunch break
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|-
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| 13:15 - 14:15
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| Tutorial - DAS servers continued
 +
| Andy Jenkinson, Rafael Jimenez, Gustavo Salazar
 +
| Java: [http://code.google.com/p/mydas/wiki/MyDASTutorial2ndPart MyDAS Part 2][http://code.google.com/p/mydas/wiki/MyDASTutorial3rdPart MyDAS Part 3]Perl:[http://www.ebi.ac.uk/~aj/das_workshop_2010/proserver_tutorial_2.html ProServer Part 2][http://www.ebi.ac.uk/~aj/das_workshop_2010/proserver_tutorial_3.html ProServer Part 3]
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|-
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|14:15 - 14:35
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|DAS clients - Putting it all together
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|Rob Finn
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| [http://www.biodas.org/workshop_2009/20090309ClientSpecReview.ppt 2009 Powerpoint]<br/>[http://www.biodas.org/workshop_2009/20090309ClientSpecReview.pdf 2009 PDF]
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|-
 +
|14:35 - 15:10
 +
|Talk and Tutorial -DAS client libraries to query DAS sources
 +
|Andy Jenkinson, Rafael Jimenez, Jose Villaveces
 +
|Javascript:[http://www.ebi.ac.uk/~jvillave/wiki/doku.php?id=jsdas JSDAS Tutorial], Java:[http://www.ebi.ac.uk/~rafael/dokuwiki/doku.php?id=das:courses:dasobert Dasobert Tutorial], Perl:[http://www.ebi.ac.uk/~aj/das_workshop_2010/daslite_tutorial.html Bio::Das::Lite]
 +
|-style="background:#ffdead;"
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| 15:10 - 15:30
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| colspan="3" | Cofee Break
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|-
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| 15:30 - 17:00
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| colspan="3" | Hands On Tutorial - continued
 +
|-  style="background:#ffdead;"
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|17:15
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| colspan="3" |Departure from Campus to Cambridge Leisure Park at circa 17:15 hrs.
 +
|}
 +
 
 +
==Day 2==
 +
 
 +
{| class="wikitable" border="1"
 +
|- style="background:silver"
 +
! width="100px"|Time
 +
! ProjectName
 +
! Speaker
 +
! Presentation
 +
|- style="background:#ffdead;"
 +
| 8:45 - 9:30
 +
| colspan="3" | Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
 +
|- style="background:#ffdead;"
 +
| 09:30 - 10:00
 +
| colspan="3" | Arrival - Tea, Coffee.
 +
|-
 +
|10:00
 +
|Opening talk
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|Tim Hubbard
 +
|[]
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|-
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|10:20
 +
|Dalliance- a new interactive DAS client
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|Thomas Down
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|[]
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|-
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|10:40
 +
|Dealing with Personal Genomes using DAS
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|Manuel Corpas
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|[]
 +
|-
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|11:00
 +
|
 +
|
 +
|[]
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|-
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|11:20
 +
|easyDAS: a hosted solution for DAS server creation
 +
|Bernat Gel
 +
|[http://www.biodas.org/workshop_2010/bernat_easydas.ppt PPT]
 +
|-
 +
|11:40
 +
|Update on the DAS Registry
 +
|Jonathan Warren
 +
|[http://www.biodas.org/workshop_2010/warren_registry.ppt PPT]
 +
|-
 +
|12:00
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|
 +
|
 +
|[]
 +
|- style="background:#ffdead;"
 +
|12:15-13:30
 +
| colspan="3" | Lunch break
 +
|-
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|13:30
 +
|
 +
|
 +
|[]
 +
|-
 +
|13:50
 +
|
 +
|
 +
|[]
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|-
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|14:10
 +
|jsDAS: A javascript DAS client library
 +
|Jose Villaveces (and Bernat Gel)
 +
|[http://www.biodas.org/workshop_2010/jose_jsdas.ppt PPT]
 +
|-
 +
|14:30
 +
|
 +
|
 +
|[]
 +
|-
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|14:50
 +
|
 +
|
 +
|[], []
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|- style="background:#ffdead;"
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|15:10-15:30
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| colspan="3" | coffee break
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|-
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|15:30
 +
|<del>Text Mining DAS source</del>
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|<del>Maximilian Haussler</del>
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|
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|-
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|15:50
 +
|
 +
|
 +
|[]
 +
|-
 +
|16:10
 +
|
 +
|
 +
|[]
 +
|-
 +
|16:30
 +
|Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups
 +
|
 +
|
 +
|-
 +
|16:50
 +
|
 +
|
 +
|
 +
|- style="background:#ffdead;"
 +
|17:10
 +
|Bus Leaves for Cambridge Travel Lodge
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|
 +
|
 +
|- style="background:#ffdead;"
 +
|19:00
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|Dinner at [http://restaurantalimentum.co.uk/index.php Alimentum] The Private Dining Room 7.00 pm for 7.30 pm sit down.
 +
|
 +
|
 +
|-
 +
|}
 +
 
 +
==Day 3==
 +
 
 +
As per other days -Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
 +
Start at 10am
 +
Departure 16:00 hrs form campus to Travellodge in order for people to get planes and trains etc back home.
 +
Finish at 4pm.
 +
 
 +
===Suggested Topics:===
 +
 
 +
[http://www.doodle.com/cvb5btwmrzz9avgh doodle poll for expressing interest in topics]

Revision as of 07:27, 26 January 2011

The 2011 DAS Workshop will be held on 2-4 Marchl at the EBI Hinxton campus.


DAS Workshop 2011 Schedule

The first 2 days will be held in the EBI training room. 3rd day room to be announced.

Day 1

Time Title Speaker Resources
8:45 - 9:30 Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
9:30 - 10:00 Coffee is served outside the training room
10:00 - 10:10 Welcome and Introduction to the Workshop Jonathan Warren
10:10 - 10:30 DAS - Introduction/Overview Andy Jenkinson Basic Introduction Technical Introduction
10:30 - 10:40 The DAS Game Rafael Jimenez Game cards
10:40 - 11:40 Hands on DAS Server Tutorials - Setting up a quick source for sharing data with your colleagues using Proserver or MyDAS - The room will be split into two groups: one for Java and one for Perl. Andy Jenkinson, Gustavo Salazar Introduction talk: PPT Java:MyDAS Part 1 Perl:ProServer Part 1
11:40 - 12:15 The DAS Registry and registering your source Jonathan Warren RegistryTutorial2010
12:15 - 13:15 Lunch break
13:15 - 14:15 Tutorial - DAS servers continued Andy Jenkinson, Rafael Jimenez, Gustavo Salazar Java: MyDAS Part 2MyDAS Part 3Perl:ProServer Part 2ProServer Part 3
14:15 - 14:35 DAS clients - Putting it all together Rob Finn 2009 Powerpoint
2009 PDF
14:35 - 15:10 Talk and Tutorial -DAS client libraries to query DAS sources Andy Jenkinson, Rafael Jimenez, Jose Villaveces Javascript:JSDAS Tutorial, Java:Dasobert Tutorial, Perl:Bio::Das::Lite
15:10 - 15:30 Cofee Break
15:30 - 17:00 Hands On Tutorial - continued
17:15 Departure from Campus to Cambridge Leisure Park at circa 17:15 hrs.

Day 2

Time ProjectName Speaker Presentation
8:45 - 9:30 Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
09:30 - 10:00 Arrival - Tea, Coffee.
10:00 Opening talk Tim Hubbard []
10:20 Dalliance- a new interactive DAS client Thomas Down []
10:40 Dealing with Personal Genomes using DAS Manuel Corpas []
11:00 []
11:20 easyDAS: a hosted solution for DAS server creation Bernat Gel PPT
11:40 Update on the DAS Registry Jonathan Warren PPT
12:00 []
12:15-13:30 Lunch break
13:30 []
13:50 []
14:10 jsDAS: A javascript DAS client library Jose Villaveces (and Bernat Gel) PPT
14:30 []
14:50 [], []
15:10-15:30 coffee break
15:30 Text Mining DAS source Maximilian Haussler
15:50 []
16:10 []
16:30 Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups
16:50
17:10 Bus Leaves for Cambridge Travel Lodge
19:00 Dinner at Alimentum The Private Dining Room 7.00 pm for 7.30 pm sit down.

Day 3

As per other days -Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.

Start at 10am 

Departure 16:00 hrs form campus to Travellodge in order for people to get planes and trains etc back home.

Finish at 4pm.

Suggested Topics:

doodle poll for expressing interest in topics

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