Difference between revisions of "DASWorkshop2010"

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(Day 2)
(Day 2)
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|13:50
 
|13:50
|Integration of info on gene expression and its temporal and spatial localization
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|KaryoDAS: An Interactive Genome Visualization Tool Using DECIPHER Data
|Jose Ramon Macias
+
|Eugene Bragin/Manuel Corpas
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/20090310_DAS_Workshop_DASxVO.ppt presentation]
+
|[]
 
|-
 
|-
 
|14:10
 
|14:10
|DAS - writeback
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|jsDAS: A javascript DAS client library
|Gustavo Salazar
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|Jose Villaveces/ Bernat Gel
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DASwriteback.pdf presentation]
+
|[]
 
|-
 
|-
 
|14:30
 
|14:30
 
|Interaction DAS
 
|Interaction DAS
 
|Hagen Blankenburg
 
|Hagen Blankenburg
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/20090310_Blankenburg_DASMI.pdf presentation]
+
|[]
 
|-
 
|-
 
|14:50
 
|14:50
|DAS for ENCODE data coordination
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|Data integration in ENFIN using standards; the EnCore DAS service
|Felix Kokocinski
+
|Rafael Jimenez
|[http://www.sanger.ac.uk/~fsk/DAS_workshop09.pdf pdf]
+
|[]
 
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|- style="background:#ffdead;"
 
|15:10-15:30
 
|15:10-15:30
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|-
 
|15:30
 
|15:30
|A web resource for selecting epitopes for antibodies
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|Text Mining DAS source
|Niall Haslam
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|Maximilian Haussler
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/NiallHaslamDAS2009.pdf presentation]
+
|[]
 
|-
 
|-
 
|15:50
 
|15:50
|DAS Searches
+
|Update on the collaborative, web-based version of Apollo
|Andreas Prlic
+
|Gregg Helt
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DAS_searches_20090310.pdf presentation]
+
|[]
 
|-
 
|-
 
|16:10
 
|16:10
|A karyotype DAS client
+
|
|Rafael Jimenez
+
|
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/rjimenez_dasworkshop2009_KDC.ppt presentation]
+
|[]
 
|-
 
|-
 
|16:30
 
|16:30
|DASher, a standalone Java client for DAS protein sequence features
+
|
|David Messina
+
|
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Messina_DASconf09.keynote.zip presentation] [http://www.sanger.ac.uk/Software/analysis/das/presentations/Messina_DASconf09.pdf pdf]
+
|[]
 
|-
 
|-
 
|16:50
 
|16:50
|Data Federation - BioMart & DAS
+
|
|Syed Haider
+
|
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/BioMart_DAS_2009.ppt presentation]
+
|
 
|-
 
|-
 
|17:10
 
|17:10
|Update on the collaborative, web-based version of Apollo
+
|
|Gregg Helt
+
|
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Trellis_Mar2009.pptx presentation]
+
|[]
 
|-
 
|-
 
|17:30
 
|17:30

Revision as of 08:01, 16 March 2010

DAS Workshop 2010 Schedule

Day 2

Time ProjectName Speaker Presentation
09:30 - 10:00 Arrival - Tea, Coffee.
10:00 Opening talk Tim Hubbard presentation
10:20 Collaborative genomics with DAS- a new interactive DAS client Thomas Down []
10:40 Progress to report on linking EMBOSS and DAS Peter Rice []
11:00 Visualization of sequence features with STRAP Christoph Gille []
11:20 easyDAS: a hosted solution for DAS server creation Bernat Gel presentation
11:40 Update on the DAS Registry Jonathan Warren []
12:00 DAS service to provide information on 3D motifs- PDBe Adel Golovin []
12:15-13:30 Lunch break
13:30 DAS Writeback and its integration in Dasty2 as a proof of concept Gustavo Salazar []
13:50 KaryoDAS: An Interactive Genome Visualization Tool Using DECIPHER Data Eugene Bragin/Manuel Corpas []
14:10 jsDAS: A javascript DAS client library Jose Villaveces/ Bernat Gel []
14:30 Interaction DAS Hagen Blankenburg []
14:50 Data integration in ENFIN using standards; the EnCore DAS service Rafael Jimenez []
15:10-15:30 coffee break
15:30 Text Mining DAS source Maximilian Haussler []
15:50 Update on the collaborative, web-based version of Apollo Gregg Helt []
16:10 []
16:30 []
16:50
17:10 []
17:30 Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups