Difference between revisions of "DASWorkshop2010"

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==Day2==
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==Day 2==
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{| class="wikitable" border="1"
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|- style="background:silver"
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! width="100px"|Time
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! ProjectName
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! Speaker
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! Presentation
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|- style="background:#ffdead;"
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| 09:30 - 10:00
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| colspan="3" | Arrival - Tea, Coffee.
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|-
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|10:00
 +
|Opening talk
 +
|Tim Hubbard
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/200903DASworkshop.ppt presentation]
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|-
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|10:20
 +
|Collaborative Annotation tool (MaDAS)
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|Victor de la Torre
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/MaDAS_victor_de_la_torre.pptx presentation]
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|-
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|10:40
 +
|Jalview / VAMSAS
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|Jim Procter / Geoff Barton
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Jalview_2009_DAS.pdf presentation]
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|-
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|11:00
 +
|Pfam
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|Rob Finn
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/20090309PfamDasWorkShop.ppt presentation]
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|-
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|11:20
 +
|DASgenexp
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|Bernat Gel
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DASGenExp3.ppt presentation]
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|-
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|11:40
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|Dasty2
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|Rafael Jimenez
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/rjimenez_dasworkshop2009_dasty2.ppt presentation]
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|-
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|12:00
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|EMBOSS as an efficient DAS annotation source
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|Peter Rice, Mahmut Uludag
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DAS-Rice-Uludag.ppt presentation]
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|- style="background:#ffdead;"
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|12:15-13:30
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| colspan="3" | Lunch break
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|-
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|13:30
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|Ensembl
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|James Smith
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|[http://www.sanger.ac.uk/Software/analysis/das/presentations/2009-das-talk-smith.ppt presentation]
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|-
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|13:50
 +
|Integration of info on gene expression and its temporal and spatial localization
 +
|Jose Ramon Macias
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/20090310_DAS_Workshop_DASxVO.ppt presentation]
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|-
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|14:10
 +
|DAS - writeback
 +
|Gustavo Salazar
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DASwriteback.pdf presentation]
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|-
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|14:30
 +
|Interaction DAS
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|Hagen Blankenburg
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/20090310_Blankenburg_DASMI.pdf presentation]
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|-
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|14:50
 +
|DAS for ENCODE data coordination
 +
|Felix Kokocinski
 +
|[http://www.sanger.ac.uk/~fsk/DAS_workshop09.pdf pdf]
 +
|- style="background:#ffdead;"
 +
|15:10-15:30
 +
| colspan="3" | coffee break
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|-
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|15:30
 +
|A web resource for selecting epitopes for antibodies
 +
|Niall Haslam
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/NiallHaslamDAS2009.pdf presentation]
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|-
 +
|15:50
 +
|DAS Searches
 +
|Andreas Prlic
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/DAS_searches_20090310.pdf presentation]
 +
|-
 +
|16:10
 +
|A karyotype DAS client
 +
|Rafael Jimenez
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/rjimenez_dasworkshop2009_KDC.ppt presentation]
 +
|-
 +
|16:30
 +
|DASher, a standalone Java client for DAS protein sequence features
 +
|David Messina
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Messina_DASconf09.keynote.zip presentation] [http://www.sanger.ac.uk/Software/analysis/das/presentations/Messina_DASconf09.pdf pdf]
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|-
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|16:50
 +
|Data Federation - BioMart & DAS
 +
|Syed Haider
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/BioMart_DAS_2009.ppt presentation]
 +
|-
 +
|17:10
 +
|Trellis DAS2 framework- which includes the DAS1-->DAS2 proxy and alpha UCSC DAS2 server
 +
|Gregg Helt
 +
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Trellis_Mar2009.pptx presentation]
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|-
 +
|17:30
 +
|Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups
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|
 +
|
 +
|-
 +
|}

Revision as of 07:31, 16 March 2010

DAS Workshop 2010 Schedule

Day 2

Time ProjectName Speaker Presentation
09:30 - 10:00 Arrival - Tea, Coffee.
10:00 Opening talk Tim Hubbard presentation
10:20 Collaborative Annotation tool (MaDAS) Victor de la Torre presentation
10:40 Jalview / VAMSAS Jim Procter / Geoff Barton presentation
11:00 Pfam Rob Finn presentation
11:20 DASgenexp Bernat Gel presentation
11:40 Dasty2 Rafael Jimenez presentation
12:00 EMBOSS as an efficient DAS annotation source Peter Rice, Mahmut Uludag presentation
12:15-13:30 Lunch break
13:30 Ensembl James Smith presentation
13:50 Integration of info on gene expression and its temporal and spatial localization Jose Ramon Macias presentation
14:10 DAS - writeback Gustavo Salazar presentation
14:30 Interaction DAS Hagen Blankenburg presentation
14:50 DAS for ENCODE data coordination Felix Kokocinski pdf
15:10-15:30 coffee break
15:30 A web resource for selecting epitopes for antibodies Niall Haslam presentation
15:50 DAS Searches Andreas Prlic presentation
16:10 A karyotype DAS client Rafael Jimenez presentation
16:30 DASher, a standalone Java client for DAS protein sequence features David Messina presentation pdf
16:50 Data Federation - BioMart & DAS Syed Haider presentation
17:10 Trellis DAS2 framework- which includes the DAS1-->DAS2 proxy and alpha UCSC DAS2 server Gregg Helt presentation
17:30 Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups
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