Difference between revisions of "DAS/2"
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# [http://genoviz.sourceforge.net An open-source DAS/2 client implementation] | # [http://genoviz.sourceforge.net An open-source DAS/2 client implementation] | ||
# [http://sourceforge.net/projects/dasypus An open-source client library and server validation suite] | # [http://sourceforge.net/projects/dasypus An open-source client library and server validation suite] | ||
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== DAS/2 History == | == DAS/2 History == | ||
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== Clients == | == Clients == | ||
| − | + | The following software packages operate as clients capable of interacting with servers supporting the DAS/2 protocol: | |
| + | * [http://genoviz.sourceforge.net IGB - Integrated Genome Browser] | ||
| + | * [http://www.gmod.org/ggb/ GBrowse - Generic Genome Browser] | ||
| − | == | + | == Servers == |
| − | + | The following software packages operate as servers capable of providing data in response to queries conforming with the DAS/2 protocol: | |
| + | * [http://das.biopackages.net/das/genome Biopackages DAS/2 server] - a DAS/2 reference implementation | ||
| + | * [http://netaffxdas.affymetrix.com/das2 Affymetrix Public DAS/2 server] | ||
== Publishing and Discovery of DAS/2 sources == | == Publishing and Discovery of DAS/2 sources == | ||
See [[DAS_registry]] | See [[DAS_registry]] | ||
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== Global Sequence Identifiers== | == Global Sequence Identifiers== | ||
See [[GlobalSeqIDs]] | See [[GlobalSeqIDs]] | ||
Revision as of 15:51, 21 February 2007
The DAS/2 Protocol
Contents
About DAS/2
DAS/2 is a more flexible and powerful version of the original DAS/1. The DAS/2 code base consists of:
- The DAS/2 specification
- A publically accessible DAS/2 server implementation (open source code available from the GMOD project)
- An open-source DAS/2 client implementation
- An open-source client library and server validation suite
DAS/2 History
DAS/2 evolved from the DAS/1 version through a community-driven process, informed by a variety of RFCs (Requests for Comment) received from the user community. DAS/2 development officially commenced in July 2004 when a 2-year NIH grant was funded. Participating in the DAS/2 grant are Affymetrix, Cold Spring Harbor Lab, the European Bioinformatics Institute/Sanger Center, and Dalke Scientific.
Clients
The following software packages operate as clients capable of interacting with servers supporting the DAS/2 protocol:
Servers
The following software packages operate as servers capable of providing data in response to queries conforming with the DAS/2 protocol:
- Biopackages DAS/2 server - a DAS/2 reference implementation
- Affymetrix Public DAS/2 server
Publishing and Discovery of DAS/2 sources
See DAS_registry
Global Sequence Identifiers
See GlobalSeqIDs
