Revision as of 16:19, 11 February 2011

The 2011 DAS Workshop will be held on 2-4 Marchl at the EBI Hinxton campus.

DAS Workshop 2011 Schedule

The first 2 days will be held in the EBI training room. 3rd day room to be announced.

Some knowledge/experience of PERL or Java and or Javascript would be beneficial for the hands on training day.

Time	Title	Speaker	Resources
8:45 - 9:30	Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
9:30 - 09:50	Coffee is served outside the training room
09:50 - 10:00	Welcome and Introduction to the Workshop	Jonathan Warren
10:00 - 10:20	DAS - Introduction/Overview	Andy Jenkinson
10:20 - 10:35	The DAS Game	Rafael Jimenez
10:35 - 11:25	Hands-on tutorial: using DAS software, 10 minute introduction of some DAS implementations (Bernat)	Bernat Gel, Thomas Down, Jose Villavaces	Creating DAS sources from GFF files supplied using easyDAS (Bernat), Viewing DAS sources using Dalliance (Thomas) -or- Dasty3 (Jose)
11:25 - 12:15	Hands-on programming tutorial: Creating a custom DAS source	Jonathan Warren	10 minute introduction to DAS servers (Gustavo), MyDAS (Gustavo) -or- ProServer (Andy), Each will use the same examples
12:15 - 13:15	Lunch break
13:15 - 14:50	Tutorial - DAS servers continued	Andy Jenkinson and Gustavo Salazar	Perl(ProServer) and Java(MyDAS)
14:50 - 15:10	Hands on Tutorial The DAS registry: Short introduction talk then hands on tutorial	Jonathan Warren	The DAS registry
15:10 - 15:30	Cofee Break
15:30 - 17:15	Hands-on programming tutorial: DAS client libraries, 10 minute introduction (Leyla)	Leyla Garcia	Bio::Das::Lite -or- JAXB (Rafael) -or- JSDAS (Jose & Bernat), Each will cover sources, sequence & features using the same examples
17:30	Departure from Campus to Cambridge Leisure Park at circa 17:30 hrs.
19:00	Dinner at Browns The Private Dining Room 7.00 pm for 7.30 pm sit down.

Preliminary schedule where the order and content may still change considerably.

Time	ProjectName	Speaker	Presentation
8:45 - 9:30	Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
09:30 - 10:00	Arrival - Tea, Coffee.
10:00	Opening talk	Tim Hubbard	[]
10:20	Dalliance- a new interactive DAS client	Thomas Down	[]
			[]
11:00	DAS search	Gustavo Salazar	[]
11:20	easyDAS: a hosted solution for DAS server creation	Bernat Gel	PPT
11:40	Update on the DAS Registry	Jonathan Warren	PPT
12:00	Gregg Helt	WebApollo: Extending JBrowse to support DAS and genome annotation editing	[]
12:15-13:30	Lunch break
13:30	EBI Search	Andy Jenkinson	[]
13:50	Dealing with Personal Genomes using DAS	Manuel Corpas	[]
14:10	Dasty update	Jose Villaveces (and Leyla Garcia)	PPT
14:30	EMBOSS as a DAS client	Peter Rice, Mahmut Uludag	[]
14:50			[], []
15:10-15:30	coffee break
15:30
15:50			[]
16:10			[]
16:30	Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups
16:50
17:10	Bus Leaves for Cambridge Travel Lodge

Location is the Floating room in the Morgan Building at the Sanger institute.

As per other days -Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.

Start at 10am

Departure 16:00 hrs form campus to Travellodge in order for people to get planes and trains etc back home.

Finish at 4pm.

Can we extend DAS to give better support for more interactive client navigation? Things like next/previous feature buttons.

Customized html labels/pop ups? (JW)

Improvements, Schema Driven? (JW, RJ))

@@ Line 6: / Line 6: @@
 The first 2 days will be held in the EBI training room. 3rd day room to be announced.
 ==Day 1==
+Some knowledge/experience of PERL or Java and or Javascript would be beneficial for the hands on training day.
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