Difference between revisions of "DASWorkshop2011"
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Revision as of 14:16, 1 February 2011
The 2011 DAS Workshop will be held on 2-4 Marchl at the EBI Hinxton campus.
- Information & registration: http://www.ebi.ac.uk//training/onsite/110302DAS.html
Contents
- 1 DAS Workshop 2011 Schedule
DAS Workshop 2011 Schedule
The first 2 days will be held in the EBI training room. 3rd day room to be announced.
Day 1
| Time | Title | Speaker | Resources |
|---|---|---|---|
| 8:45 - 9:30 | Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus. | ||
| 9:30 - 10:00 | Coffee is served outside the training room | ||
| 10:00 - 10:10 | Welcome and Introduction to the Workshop | Jonathan Warren | |
| 10:10 - 10:30 | DAS - Introduction/Overview | Andy Jenkinson | Basic Introduction Technical Introduction |
| 10:30 - 10:40 | The DAS Game | Rafael Jimenez | Game cards |
| 10:40 - 11:40 | Hands on DAS Server Tutorials - Setting up a quick source for sharing data with your colleagues using Proserver or MyDAS - The room will be split into two groups: one for Java and one for Perl. | Andy Jenkinson, Gustavo Salazar | Introduction talk: PPT Java:MyDAS Part 1 Perl:ProServer Part 1 |
| 11:40 - 12:15 | The DAS Registry and registering your source | Jonathan Warren | RegistryTutorial2010 |
| 12:15 - 13:15 | Lunch break | ||
| 13:15 - 14:15 | Tutorial - DAS servers continued | Andy Jenkinson, Rafael Jimenez, Gustavo Salazar | Java: MyDAS Part 2MyDAS Part 3Perl:ProServer Part 2ProServer Part 3 |
| 14:15 - 14:35 | DAS clients - Putting it all together | Rob Finn | 2009 Powerpoint 2009 PDF |
| 14:35 - 15:10 | Talk and Tutorial -DAS client libraries to query DAS sources | Andy Jenkinson, Rafael Jimenez, Jose Villaveces | Javascript:JSDAS Tutorial, Java:Dasobert Tutorial, Perl:Bio::Das::Lite |
| 15:10 - 15:30 | Cofee Break | ||
| 15:30 - 17:00 | Hands On Tutorial - continued | ||
| 17:15 | Departure from Campus to Cambridge Leisure Park at circa 17:15 hrs. | ||
Day 2
Preliminary schedule where the order and content may still change considerably.
| Time | ProjectName | Speaker | Presentation |
|---|---|---|---|
| 8:45 - 9:30 | Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus. | ||
| 09:30 - 10:00 | Arrival - Tea, Coffee. | ||
| 10:00 | Opening talk | Tim Hubbard | [] |
| 10:20 | Dalliance- a new interactive DAS client | Thomas Down | [] |
| [] | |||
| 11:00 | DAS search | Gustavo Salazar | [] |
| 11:20 | easyDAS: a hosted solution for DAS server creation | Bernat Gel | PPT |
| 11:40 | Update on the DAS Registry | Jonathan Warren | PPT |
| 12:00 | Gregg Helt | WebApollo: Extending JBrowse to support DAS and genome annotation editing | [] |
| 12:15-13:30 | Lunch break | ||
| 13:30 | EBI Search | Andy Jenkinson | [] |
| 13:50 | Dealing with Personal Genomes using DAS | Manuel Corpas | [] |
| 14:10 | Dasty update | Jose Villaveces (and Leyla Garcia) | PPT |
| 14:30 | [] | ||
| 14:50 | [], [] | ||
| 15:10-15:30 | coffee break | ||
| 15:30 | |||
| 15:50 | [] | ||
| 16:10 | [] | ||
| 16:30 | Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups | ||
| 16:50 | |||
| 17:10 | Bus Leaves for Cambridge Travel Lodge | ||
| 19:00 | Dinner at [Restaurant to be confirmed - likely walking distance to the travel lodge] The Private Dining Room 7.00 pm for 7.30 pm sit down. | ||
Day 3
As per other days -Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
Start at 10am
Departure 16:00 hrs form campus to Travellodge in order for people to get planes and trains etc back home.
Finish at 4pm.
Suggested Topics:
Discussion about fitting alternative data formats into the DAS ecosystem (TAD)
Security - authorization and authentication for clients, servers, registry (GS, AJ, JW)
Genome alignments in DAS (TAD)
Improving interactivity of DAS data (TAD)
Can we extend DAS to give better support for more interactive client navigation? Things like next/previous feature buttons.
