Difference between revisions of "DAS/1"
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** [http://sourceforge.net/project/showfiles.php?group_id=28453&release_id=60810 OmniDAS/OmniGene] | ** [http://sourceforge.net/project/showfiles.php?group_id=28453&release_id=60810 OmniDAS/OmniGene] | ||
| − | == Servers == | + | == DAS/1 Servers == |
* [http://netaffxdas.affymetrix.com/das/ Affymetrix] | * [http://netaffxdas.affymetrix.com/das/ Affymetrix] | ||
Revision as of 22:22, 16 May 2007
The DAS/1 Protocol
Contents
About DAS/1
The original version 1 specification, written by Lincoln Stein, Sean Eddy, and Robin Dowell, is the basis for a number of clients and servers. More than 200 DAS/1 servers are currently running worldwide including WormBase, FlyBase, Ensembl, TIGR, UCSC, and UniProt. A number of websites and software applications are based on DAS.
The DAS/1 specification is available at http://www.biodas.org/documents/spec.html
DAS/1/Overview provides a glossary and list of concepts.
DAS/1 Clients
- Older (still maintained?):
DAS/1 Servers
- Affymetrix
- BioSapiens servers
- Ensembl server
- KEGG DAS
- Sanger Dazzle server
- TIGR's listing of servers
- UCSC server
How to set up a DAS/1 server
In general it is quite easy to set up DAS server. All the server implementations are easy to set up. Most server implementations allow easy setup using ready provided data-adaptors (e.g. for GFF files). For custom data simple plugins can be written to quickly provide your data via DAS.
DAS server implementations are available in several programming languages:
- Perl
Proserver LDAS
- Java
Dazzle
Publishing and Discovery of DAS/1 sources
See DasRegistry
