Difference between revisions of "DASWorkshop2010"
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| − | | | + | |Progress to report on linking EMBOSS and DAS |
| − | | | + | |Peter Rice |
|[http://www.sanger.ac.uk/Software/analysis/das/presentations/Jalview_2009_DAS.pdf presentation] | |[http://www.sanger.ac.uk/Software/analysis/das/presentations/Jalview_2009_DAS.pdf presentation] | ||
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Revision as of 11:41, 16 March 2010
DAS Workshop 2010 Schedule
Day 2
| Time | ProjectName | Speaker | Presentation |
|---|---|---|---|
| 09:30 - 10:00 | Arrival - Tea, Coffee. | ||
| 10:00 | Opening talk | Tim Hubbard | presentation |
| 10:20 | Collaborative genomics with DAS- a new interactive DAS client | Thomas Down | [] |
| 10:40 | Progress to report on linking EMBOSS and DAS | Peter Rice | presentation |
| 11:00 | Pfam | Rob Finn | presentation |
| 11:20 | DASgenexp | Bernat Gel | presentation |
| 11:40 | Dasty2 | Rafael Jimenez | presentation |
| 12:00 | EMBOSS as an efficient DAS annotation source | Peter Rice, Mahmut Uludag | presentation |
| 12:15-13:30 | Lunch break | ||
| 13:30 | Ensembl | James Smith | presentation |
| 13:50 | Integration of info on gene expression and its temporal and spatial localization | Jose Ramon Macias | presentation |
| 14:10 | DAS - writeback | Gustavo Salazar | presentation |
| 14:30 | Interaction DAS | Hagen Blankenburg | presentation |
| 14:50 | DAS for ENCODE data coordination | Felix Kokocinski | |
| 15:10-15:30 | coffee break | ||
| 15:30 | A web resource for selecting epitopes for antibodies | Niall Haslam | presentation |
| 15:50 | DAS Searches | Andreas Prlic | presentation |
| 16:10 | A karyotype DAS client | Rafael Jimenez | presentation |
| 16:30 | DASher, a standalone Java client for DAS protein sequence features | David Messina | presentation pdf |
| 16:50 | Data Federation - BioMart & DAS | Syed Haider | presentation |
| 17:10 | Trellis DAS2 framework- which includes the DAS1-->DAS2 proxy and alpha UCSC DAS2 server | Gregg Helt | presentation |
| 17:30 | Discussion/talk about activity organisation of next day - preliminary groups and chairs of groups | ||
