Difference between revisions of "DASworkshop200802"

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| [http://www.ebi.ac.uk/~aj/das_workshop_2008/proserver_tutorial.html ProServer: writing a SourceAdaptor]<br/>
 
| [http://www.ebi.ac.uk/~aj/das_workshop_2008/proserver_tutorial.html ProServer: writing a SourceAdaptor]<br/>
 
[http://www.biojava.org/wiki/Dazzle:plugins Dazzle: using existing plugins]<br/>
 
[http://www.biojava.org/wiki/Dazzle:plugins Dazzle: using existing plugins]<br/>
[http://www.biojava.org/wiki/Dazzle:writeplugin Dazzle: writing a plugin]
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[http://www.biojava.org/wiki/Dazzle:writeplugin Dazzle: writing a plugin]<br/>
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[http://www.ebi.ac.uk/~pjones/public_html/DAS2008/chr21.gff Chromosome 21 GFF File]
 
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| 15:10 - 15:30
 
| 15:10 - 15:30

Revision as of 09:56, 26 February 2008

DAS workshop February 25th, 26th Genome Campus, Hinxton

BioSapiens Network

Day 1

schedule see at

http://www.dasregistry.org/course.jsp

Day 2

Time Title Speaker Resources
09:15 - 10:00 DAS - Technical Introduction Phil Jones Presentation:
Powerpoint
Open Document Format
PDF
10:00 - 10:35 DAS Introductory Tutorial - DAS servers and the DAS Registration Service Phil Jones Introductory Tutorial
10:35 - 11:15 DAS - Client Demonstration: Ensembl, grouping and histograms Eugene Kulesha
11:15 - 11:40 Coffee break
11:40 - 12:10 Dasty2 Rafael Jimenez
12:10 - 12:40 SPICE, Mapping features on 3D, viewing alignments Andreas Prlic SPICE links
12:40 - 13:40 Lunch break
13:40 - 14:10 Pepper Jose Ramon Macias http://biocomp.cnb.csic.es/das
14:10 - 15:10 DAS: Setting Up Your Own Server. In this section the group will split into two tracks - one for Perl programmers and one for Java programmers. Proserver: Andy Jenkinson

Dazzle: Andreas Prlic

ProServer: writing a SourceAdaptor

Dazzle: using existing plugins
Dazzle: writing a plugin
Chromosome 21 GFF File

15:10 - 15:30 Coffee break
15:30 - 16:30 DAS - Coding a Client. Bio::Das::Lite (Perl) - Andy Jenkinson

Dasobert (Java) - Andreas Prlic

Bio::Das::Lite tutorial