DASWorkshop2012

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The 2012 DAS Workshop will be held on 27-29 Feb at the EBI Hinxton campus.


DAS Workshop 2012 Schedule

All 3 days will be held in the EBI training room.

Day 1

Some knowledge/experience of PERL or Java and or Javascript would be beneficial for the hands on training day.

Example DAS commands can be found here as a DAS quick reference guide: DAS examples

Time Title Speaker Resources
8:45 - 9:30 Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.
9:30 - 09:50 Coffee is served outside the training room
09:50 - 10:00 Welcome and Introduction to the Workshop Jonathan Warren
10:00 - 10:20 DAS - Introduction/Overview Andy Jenkinson Introduction Technical Introduction
10:20 - 10:35 The DAS Game Rafael Jimenez The DAS Game
10:35 - 11:25 Hands-on tutorial: using DAS software, 10 minute introduction of some DAS implementations (Bernat) Bernat Gel, Thomas Down, Jose Villavaces Implementations. PPT Creating DAS sources from GFF files supplied using easyDAS (Bernat), Viewing DAS sources using Dalliance (Thomas) PDF-or- Dasty3 (Jose) PDF
11:25 - 12:15 Hands-on programming tutorial: Creating a custom DAS source Gustavo, Andy 10 minute introduction to DAS servers, MyDAS -or- ProServer
12:15 - 13:15 Lunch break
13:15 - 14:50 Tutorial - DAS servers continued Andy Jenkinson and Gustavo Salazar Perl(ProServer) and Java(MyDAS)
14:50 - 15:10 Hands on Tutorial The DAS registry: Short introduction talk then hands on tutorial Jonathan Warren DAS Registry Tutorial
15:10 - 15:30 Cofee Break
15:30 - 17:15 Hands-on programming tutorial: DAS client libraries, 10 minute introduction Andy, Rafael, Leyla, Jose, Bernat Bio::Das::Lite-or- JDAS -or- JSDAS. Each will cover sources, sequence & features using the same examples
17:30 Departure from Campus to Cambridge Travel Lodge and Leisure Park at circa 17:30 hrs.
19:00 Dinner at Browns directions from Travel lodge The Private Dining Room 7.00 pm for 7.30 pm sit down. There is a large bus for this journey at 17.30 and so we encourage campus people who would normally use the campus bus to take the workshop bus. Browns is approx 25 minute walk from the travel lodge we are currently suggesting a pub stop at The Snug on the way. People will be responsible for getting back to their hotel or home after the restaurant.

Day 2

Day 3


Location is the EBI Training Room

As per other days -Departure from the Travelodge Cambridge Leisure Park at 08:45 hrs to Campus.

Start at 10am

Departure 16:00 hrs form campus to Travelodge in order for people to get planes and trains etc back home.

Finish at 4pm.


Recent developments since the last workshop

DAS writeback, DAS search, Registry CRUD via web service (get, post, put, delete), Registry supports JSON for all requests and responses,

Suggestions for discussions on Developers Day

  • JSON roll out to other servers and clients? (jw)
  • Firming up of the authentication DAS standard so the registry and writeback are consistent (jw)
  • Add support for conditional get (If-Modified-Since - reply only if modified since the modified since header) ? (jw)

Possible DAS related Talks

DAS Registry - new architecture and capabilities (jw)