Difference between revisions of "DASMergerLinks"

From BioDAS
Jump to: navigation, search
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
*Write back for DAS2 http://biodas.org/documents/das2/das2_writeback.html for DAS1.5 http://code.google.com/p/daswriteback/ at the bottom of this page is a link to the masters thesis on this as well. Is there any more recent stuff on this from Gustavo, other than the reams of emails on the das list...  Andy?  
+
*Write back for DAS2  
 
+
http://biodas.org/documents/das2/das2_writeback.html
 
+
  http://code.google.com/p/daswriteback/ at the bottom of this page is a link to the masters thesis on this as well. Is there any more recent stuff on this from Gustavo, other than the reams of emails on the das list...  Andy?  
*Ontologies http://www.dasregistry.org/extension_ontology.jsp
+
*Ontologies  
 
+
http://www.dasregistry.org/extension_ontology.jsp
 
+
*1.53 Extensions
*1.53 Extensions - http://www.dasregistry.org/spec_1.53E.jsp links to the main extensions including sources (taken from DAS2 http://biodas.org/documents/das2/das2_get.html#sources_overview), alignment, structure, interaction and volmap.
+
http://www.dasregistry.org/spec_1.53E.jsp links to the main extensions including sources (taken from DAS2 http://biodas.org/documents/das2/das2_get.html#sources_overview), alignment, structure, interaction and volmap.
 
+
*hierarchy's - nothing for DAS1 for DAS2:  
*hierarchy's - nothing for DAS1 for DAS2: http://biodas.org/documents/das2/das2_get.html#features_detailed
+
http://biodas.org/documents/das2/das2_get.html#features_detailed
 
+
*style sheets
*style sheets http://www.biodas.org/wiki/Spec_Review#Stylesheet_Command
+
http://www.biodas.org/wiki/Spec_Review#Stylesheet_Command
 
 
 
  http://biodas.org/documents/das2/das2_stylesheet.html
 
  http://biodas.org/documents/das2/das2_stylesheet.html
 
 
*date formats, date of annotations
 
*date formats, date of annotations
http://www.dasregistry.org/extension_timestamp.jsp
+
http://www.dasregistry.org/extension_timestamp.jsp
http://biodas.org/documents/das2/das2_get.html#iso_dates
+
http://biodas.org/documents/das2/das2_get.html#iso_dates
 
 
 
*next feature/ previous feature cmd.
 
*next feature/ previous feature cmd.
 
 
*GFF3 as a standard within DAS?
 
*GFF3 as a standard within DAS?
 
+
*"UCSC sources filtered by types" implementation catered for in the DAS Registry
*"UCSC sources filtered by types" implementation catered for in the DAS
+
currently there is nothing implemented in the registry for this
Registry  
+
*"wait" response from DAS Servers...
       
 
*currently there is nothing implemented in the registry for this
 
       
 
*also "wait" response from DAS Servers...
 

Latest revision as of 10:33, 14 November 2008

  • Write back for DAS2
http://biodas.org/documents/das2/das2_writeback.html
http://code.google.com/p/daswriteback/ at the bottom of this page is a link to the masters thesis on this as well. Is there any more recent stuff on this from Gustavo, other than the reams of emails on the das list...  Andy? 
  • Ontologies
http://www.dasregistry.org/extension_ontology.jsp
  • 1.53 Extensions
http://www.dasregistry.org/spec_1.53E.jsp links to the main extensions including sources (taken from DAS2 http://biodas.org/documents/das2/das2_get.html#sources_overview), alignment, structure, interaction and volmap.
  • hierarchy's - nothing for DAS1 for DAS2:
http://biodas.org/documents/das2/das2_get.html#features_detailed
  • style sheets
http://www.biodas.org/wiki/Spec_Review#Stylesheet_Command
http://biodas.org/documents/das2/das2_stylesheet.html
  • date formats, date of annotations
http://www.dasregistry.org/extension_timestamp.jsp
http://biodas.org/documents/das2/das2_get.html#iso_dates
  • next feature/ previous feature cmd.
  • GFF3 as a standard within DAS?
  • "UCSC sources filtered by types" implementation catered for in the DAS Registry
currently there is nothing implemented in the registry for this
  • "wait" response from DAS Servers...